#include <nonlinear_implicit_system.h>
Public Types | |
typedef NonlinearImplicitSystem | sys_type |
Public Member Functions | |
NonlinearSolver (sys_type &s) | |
virtual | ~NonlinearSolver () |
bool | initialized () const |
virtual void | clear () |
virtual void | init (const char *name=nullptr)=0 |
virtual std::pair< unsigned int, Real > | solve (SparseMatrix< T > &, NumericVector< T > &, NumericVector< T > &, const double, const unsigned int)=0 |
virtual void | print_converged_reason () |
virtual int | get_total_linear_iterations ()=0 |
virtual unsigned | get_current_nonlinear_iteration_number () const =0 |
const sys_type & | system () const |
sys_type & | system () |
void | attach_preconditioner (Preconditioner< T > *preconditioner) |
void | set_solver_configuration (SolverConfiguration &solver_configuration) |
const Parallel::Communicator & | comm () const |
processor_id_type | n_processors () const |
processor_id_type | processor_id () const |
Static Public Member Functions | |
static std::unique_ptr< NonlinearSolver< T > > | build (sys_type &s, const SolverPackage solver_package=libMesh::default_solver_package()) |
static std::string | get_info () |
static void | print_info (std::ostream &out=libMesh::out) |
static unsigned int | n_objects () |
static void | enable_print_counter_info () |
static void | disable_print_counter_info () |
Protected Types | |
typedef std::map< std::string, std::pair< unsigned int, unsigned int > > | Counts |
Protected Member Functions | |
void | increment_constructor_count (const std::string &name) |
void | increment_destructor_count (const std::string &name) |
Protected Attributes | |
sys_type & | _system |
bool | _is_initialized |
Preconditioner< T > * | _preconditioner |
SolverConfiguration * | _solver_configuration |
const Parallel::Communicator & | _communicator |
Static Protected Attributes | |
static Counts | _counts |
static Threads::atomic< unsigned int > | _n_objects |
static Threads::spin_mutex | _mutex |
static bool | _enable_print_counter = true |
This base class can be inherited from to provide interfaces to nonlinear solvers from different packages like PETSc and Trilinos.
Definition at line 34 of file nonlinear_implicit_system.h.
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protectedinherited |
Data structure to log the information. The log is identified by the class name.
Definition at line 117 of file reference_counter.h.
typedef NonlinearImplicitSystem libMesh::NonlinearSolver< T >::sys_type |
The type of system
Definition at line 68 of file nonlinear_solver.h.
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inlineexplicit |
Constructor. Initializes Solver data structures
Definition at line 386 of file nonlinear_solver.h.
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inlinevirtual |
void libMesh::NonlinearSolver< T >::attach_preconditioner | ( | Preconditioner< T > * | preconditioner | ) |
Attaches a Preconditioner object to be used during the linear solves.
Definition at line 71 of file nonlinear_solver.C.
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static |
Builds a NonlinearSolver
using the nonlinear solver package specified by solver_package
Definition at line 37 of file nonlinear_solver.C.
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inlinevirtual |
Release all memory and clear data structures.
Reimplemented in libMesh::PetscNonlinearSolver< T >, libMesh::PetscNonlinearSolver< Number >, libMesh::NoxNonlinearSolver< T >, and libMesh::NoxNonlinearSolver< Number >.
Definition at line 97 of file nonlinear_solver.h.
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inlineinherited |
Parallel::Communicator
object used by this mesh. Definition at line 89 of file parallel_object.h.
References libMesh::ParallelObject::_communicator.
Referenced by libMesh::__libmesh_petsc_diff_solver_jacobian(), libMesh::__libmesh_petsc_diff_solver_monitor(), libMesh::__libmesh_petsc_diff_solver_residual(), libMesh::__libmesh_tao_equality_constraints(), libMesh::__libmesh_tao_equality_constraints_jacobian(), libMesh::__libmesh_tao_gradient(), libMesh::__libmesh_tao_hessian(), libMesh::__libmesh_tao_inequality_constraints(), libMesh::__libmesh_tao_inequality_constraints_jacobian(), libMesh::__libmesh_tao_objective(), libMesh::MeshRefinement::_coarsen_elements(), libMesh::ExactSolution::_compute_error(), libMesh::UniformRefinementEstimator::_estimate_error(), libMesh::BoundaryInfo::_find_id_maps(), libMesh::SlepcEigenSolver< T >::_petsc_shell_matrix_get_diagonal(), libMesh::PetscLinearSolver< T >::_petsc_shell_matrix_get_diagonal(), libMesh::SlepcEigenSolver< T >::_petsc_shell_matrix_mult(), libMesh::PetscLinearSolver< T >::_petsc_shell_matrix_mult(), libMesh::PetscLinearSolver< T >::_petsc_shell_matrix_mult_add(), libMesh::EquationSystems::_read_impl(), libMesh::MeshRefinement::_refine_elements(), libMesh::MeshRefinement::_smooth_flags(), libMesh::PetscDMWrapper::add_dofs_helper(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::ImplicitSystem::add_matrix(), libMesh::System::add_vector(), libMesh::UnstructuredMesh::all_second_order(), libMesh::MeshTools::Modification::all_tri(), libMesh::LaplaceMeshSmoother::allgather_graph(), libMesh::FEMSystem::assemble_qoi(), libMesh::MeshCommunication::assign_global_indices(), libMesh::DofMap::attach_matrix(), libMesh::MeshTools::Generation::build_extrusion(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::PetscDMWrapper::build_section(), libMesh::PetscDMWrapper::build_sf(), libMesh::MeshBase::cache_elem_dims(), libMesh::System::calculate_norm(), libMesh::DofMap::check_dirichlet_bcid_consistency(), libMesh::PetscDMWrapper::check_section_n_dofs(), libMesh::Nemesis_IO_Helper::compute_num_global_elem_blocks(), libMesh::Nemesis_IO_Helper::compute_num_global_nodesets(), libMesh::Nemesis_IO_Helper::compute_num_global_sidesets(), libMesh::Problem_Interface::computeF(), libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), libMesh::ExodusII_IO::copy_elemental_solution(), libMesh::MeshTools::correct_node_proc_ids(), libMesh::MeshTools::create_bounding_box(), libMesh::MeshTools::create_nodal_bounding_box(), libMesh::MeshRefinement::create_parent_error_vector(), libMesh::MeshTools::create_processor_bounding_box(), libMesh::MeshTools::create_subdomain_bounding_box(), libMesh::MeshCommunication::delete_remote_elements(), libMesh::DofMap::distribute_dofs(), DMlibMeshFunction(), DMlibMeshJacobian(), DMlibMeshSetSystem_libMesh(), DMVariableBounds_libMesh(), libMesh::MeshRefinement::eliminate_unrefined_patches(), libMesh::EpetraVector< T >::EpetraVector(), libMesh::WeightedPatchRecoveryErrorEstimator::estimate_error(), libMesh::PatchRecoveryErrorEstimator::estimate_error(), libMesh::JumpErrorEstimator::estimate_error(), libMesh::AdjointRefinementEstimator::estimate_error(), libMesh::ExactErrorEstimator::estimate_error(), libMesh::MeshRefinement::flag_elements_by_elem_fraction(), libMesh::MeshRefinement::flag_elements_by_error_fraction(), libMesh::MeshRefinement::flag_elements_by_nelem_target(), libMesh::CondensedEigenSystem::get_eigenpair(), libMesh::DofMap::get_info(), libMesh::ImplicitSystem::get_linear_solver(), libMesh::LocationMap< T >::init(), libMesh::TimeSolver::init(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), libMesh::EigenSystem::init_data(), libMesh::EigenSystem::init_matrices(), libMesh::OptimizationSystem::initialize_equality_constraints_storage(), libMesh::OptimizationSystem::initialize_inequality_constraints_storage(), libMesh::MeshTools::libmesh_assert_consistent_distributed(), libMesh::MeshTools::libmesh_assert_consistent_distributed_nodes(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_new_node_procids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_topology_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_valid_boundary_ids(), libMesh::MeshTools::libmesh_assert_valid_dof_ids(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_flags(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_object_ids(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_p_levels(), libMesh::MeshTools::libmesh_assert_valid_refinement_flags(), libMesh::MeshTools::libmesh_assert_valid_unique_ids(), libMesh::libmesh_petsc_snes_fd_residual(), libMesh::libmesh_petsc_snes_jacobian(), libMesh::libmesh_petsc_snes_mffd_residual(), libMesh::libmesh_petsc_snes_postcheck(), libMesh::libmesh_petsc_snes_residual(), libMesh::libmesh_petsc_snes_residual_helper(), libMesh::MeshRefinement::limit_level_mismatch_at_edge(), libMesh::MeshRefinement::limit_level_mismatch_at_node(), libMesh::MeshRefinement::limit_overrefined_boundary(), libMesh::MeshRefinement::limit_underrefined_boundary(), libMesh::MeshRefinement::make_coarsening_compatible(), libMesh::MeshCommunication::make_elems_parallel_consistent(), libMesh::MeshRefinement::make_flags_parallel_consistent(), libMesh::MeshCommunication::make_new_node_proc_ids_parallel_consistent(), libMesh::MeshCommunication::make_new_nodes_parallel_consistent(), libMesh::MeshCommunication::make_node_ids_parallel_consistent(), libMesh::MeshCommunication::make_node_proc_ids_parallel_consistent(), libMesh::MeshCommunication::make_node_unique_ids_parallel_consistent(), libMesh::MeshCommunication::make_nodes_parallel_consistent(), libMesh::MeshCommunication::make_p_levels_parallel_consistent(), libMesh::MeshRefinement::make_refinement_compatible(), libMesh::FEMSystem::mesh_position_set(), libMesh::DistributedMesh::n_active_elem(), libMesh::MeshTools::n_active_levels(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::CondensedEigenSystem::n_global_non_condensed_dofs(), libMesh::MeshTools::n_levels(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::MeshTools::n_p_levels(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::DistributedMesh::parallel_max_elem_id(), libMesh::DistributedMesh::parallel_max_node_id(), libMesh::ReplicatedMesh::parallel_max_unique_id(), libMesh::DistributedMesh::parallel_max_unique_id(), libMesh::DistributedMesh::parallel_n_elem(), libMesh::DistributedMesh::parallel_n_nodes(), libMesh::SparsityPattern::Build::parallel_sync(), libMesh::MeshTools::paranoid_n_levels(), libMesh::petsc_auto_fieldsplit(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::MeshBase::prepare_for_use(), libMesh::Nemesis_IO::read(), libMesh::XdrIO::read(), libMesh::CheckpointIO::read_header(), libMesh::XdrIO::read_header(), libMesh::System::read_header(), libMesh::System::read_legacy_data(), libMesh::System::read_SCALAR_dofs(), libMesh::XdrIO::read_serialized_bc_names(), libMesh::XdrIO::read_serialized_bcs_helper(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::XdrIO::read_serialized_connectivity(), libMesh::XdrIO::read_serialized_nodes(), libMesh::XdrIO::read_serialized_nodesets(), libMesh::XdrIO::read_serialized_subdomain_names(), libMesh::System::read_serialized_vector(), libMesh::MeshBase::recalculate_n_partitions(), libMesh::MeshRefinement::refine_and_coarsen_elements(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::CheckpointIO::select_split_config(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::PetscDiffSolver::setup_petsc_data(), libMesh::LaplaceMeshSmoother::smooth(), libMesh::split_mesh(), libMesh::MeshBase::subdomain_ids(), libMesh::BoundaryInfo::sync(), libMesh::MeshRefinement::test_level_one(), libMesh::MeshRefinement::test_unflagged(), libMesh::MeshTools::total_weight(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::NameBasedIO::write(), libMesh::XdrIO::write(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::XdrIO::write_serialized_nodes(), and libMesh::XdrIO::write_serialized_nodesets().
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staticinherited |
Definition at line 106 of file reference_counter.C.
References libMesh::ReferenceCounter::_enable_print_counter.
Referenced by libMesh::LibMeshInit::LibMeshInit().
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staticinherited |
Methods to enable/disable the reference counter output from print_info()
Definition at line 100 of file reference_counter.C.
References libMesh::ReferenceCounter::_enable_print_counter.
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pure virtual |
Must be overridden in derived classes.
Implemented in libMesh::PetscNonlinearSolver< T >, libMesh::PetscNonlinearSolver< Number >, libMesh::NoxNonlinearSolver< T >, and libMesh::NoxNonlinearSolver< Number >.
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staticinherited |
Gets a string containing the reference information.
Definition at line 47 of file reference_counter.C.
References libMesh::ReferenceCounter::_counts, and libMesh::Quality::name().
Referenced by libMesh::ReferenceCounter::print_info().
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pure virtual |
Get the total number of linear iterations done in the last solve
Implemented in libMesh::PetscNonlinearSolver< T >, libMesh::PetscNonlinearSolver< Number >, libMesh::NoxNonlinearSolver< T >, and libMesh::NoxNonlinearSolver< Number >.
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inlineprotectedinherited |
Increments the construction counter. Should be called in the constructor of any derived class that will be reference counted.
Definition at line 181 of file reference_counter.h.
References libMesh::ReferenceCounter::_counts, libMesh::Quality::name(), and libMesh::Threads::spin_mtx.
Referenced by libMesh::ReferenceCountedObject< RBParametrized >::ReferenceCountedObject().
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inlineprotectedinherited |
Increments the destruction counter. Should be called in the destructor of any derived class that will be reference counted.
Definition at line 194 of file reference_counter.h.
References libMesh::ReferenceCounter::_counts, libMesh::Quality::name(), and libMesh::Threads::spin_mtx.
Referenced by libMesh::ReferenceCountedObject< RBParametrized >::~ReferenceCountedObject().
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pure virtual |
Initialize data structures if not done so already. May assign a name to the solver in some implementations
Implemented in libMesh::PetscNonlinearSolver< T >, libMesh::PetscNonlinearSolver< Number >, libMesh::NoxNonlinearSolver< T >, and libMesh::NoxNonlinearSolver< Number >.
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inline |
true
if the data structures are initialized, false otherwise. Definition at line 92 of file nonlinear_solver.h.
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inlinestaticinherited |
Prints the number of outstanding (created, but not yet destroyed) objects.
Definition at line 83 of file reference_counter.h.
References libMesh::ReferenceCounter::_n_objects.
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inlineinherited |
Definition at line 95 of file parallel_object.h.
References libMesh::ParallelObject::_communicator, and libMesh::Parallel::Communicator::size().
Referenced by libMesh::BoundaryInfo::_find_id_maps(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::DistributedMesh::add_elem(), libMesh::DistributedMesh::add_node(), libMesh::LaplaceMeshSmoother::allgather_graph(), libMesh::FEMSystem::assembly(), libMesh::AztecLinearSolver< T >::AztecLinearSolver(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::DistributedMesh::clear(), libMesh::Nemesis_IO_Helper::compute_border_node_ids(), libMesh::Nemesis_IO_Helper::construct_nemesis_filename(), libMesh::UnstructuredMesh::create_pid_mesh(), libMesh::MeshTools::create_processor_bounding_box(), libMesh::DofMap::distribute_dofs(), libMesh::DofMap::distribute_local_dofs_node_major(), libMesh::DofMap::distribute_local_dofs_var_major(), libMesh::EnsightIO::EnsightIO(), libMesh::MeshBase::get_info(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), libMesh::Nemesis_IO_Helper::initialize(), libMesh::DistributedMesh::insert_elem(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_new_node_procids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_topology_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_valid_boundary_ids(), libMesh::MeshTools::libmesh_assert_valid_dof_ids(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::MeshTools::libmesh_assert_valid_refinement_flags(), libMesh::DofMap::local_variable_indices(), libMesh::MeshRefinement::make_coarsening_compatible(), libMesh::MeshBase::n_active_elem_on_proc(), libMesh::MeshBase::n_elem_on_proc(), libMesh::MeshBase::n_nodes_on_proc(), libMesh::MeshBase::partition(), libMesh::PetscLinearSolver< T >::PetscLinearSolver(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::NameBasedIO::read(), libMesh::Nemesis_IO::read(), libMesh::CheckpointIO::read(), libMesh::CheckpointIO::read_connectivity(), libMesh::XdrIO::read_header(), libMesh::CheckpointIO::read_nodes(), libMesh::System::read_parallel_data(), libMesh::System::read_SCALAR_dofs(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::System::read_serialized_vector(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::DistributedMesh::update_parallel_id_counts(), libMesh::GMVIO::write_binary(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::System::write_parallel_data(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::XdrIO::write_serialized_nodes(), and libMesh::XdrIO::write_serialized_nodesets().
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inlinevirtual |
Prints a useful message about why the latest nonlinear solve con(di)verged.
Reimplemented in libMesh::PetscNonlinearSolver< T >, and libMesh::PetscNonlinearSolver< Number >.
Definition at line 118 of file nonlinear_solver.h.
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staticinherited |
Prints the reference information, by default to libMesh::out
.
Definition at line 87 of file reference_counter.C.
References libMesh::ReferenceCounter::_enable_print_counter, and libMesh::ReferenceCounter::get_info().
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inlineinherited |
Definition at line 101 of file parallel_object.h.
References libMesh::ParallelObject::_communicator, and libMesh::Parallel::Communicator::rank().
Referenced by libMesh::BoundaryInfo::_find_id_maps(), libMesh::EquationSystems::_read_impl(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::DistributedMesh::add_elem(), libMesh::BoundaryInfo::add_elements(), libMesh::DofMap::add_neighbors_to_send_list(), libMesh::DistributedMesh::add_node(), libMesh::UnstructuredMesh::all_second_order(), libMesh::MeshTools::Modification::all_tri(), libMesh::FEMSystem::assembly(), libMesh::EquationSystems::build_discontinuous_solution_vector(), libMesh::Nemesis_IO_Helper::build_element_and_node_maps(), libMesh::InfElemBuilder::build_inf_elem(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::DistributedMesh::clear(), libMesh::ExodusII_IO_Helper::close(), libMesh::Nemesis_IO_Helper::compute_border_node_ids(), libMesh::Nemesis_IO_Helper::compute_communication_map_parameters(), libMesh::Nemesis_IO_Helper::compute_internal_and_border_elems_and_internal_nodes(), libMesh::Nemesis_IO_Helper::compute_node_communication_maps(), libMesh::Nemesis_IO_Helper::compute_num_global_elem_blocks(), libMesh::Nemesis_IO_Helper::compute_num_global_nodesets(), libMesh::Nemesis_IO_Helper::compute_num_global_sidesets(), libMesh::Nemesis_IO_Helper::construct_nemesis_filename(), libMesh::MeshTools::correct_node_proc_ids(), libMesh::ExodusII_IO_Helper::create(), libMesh::DistributedMesh::delete_elem(), libMesh::DistributedMesh::delete_node(), libMesh::MeshCommunication::delete_remote_elements(), libMesh::DofMap::distribute_dofs(), libMesh::DofMap::distribute_local_dofs_node_major(), libMesh::DofMap::distribute_local_dofs_var_major(), libMesh::DistributedMesh::DistributedMesh(), libMesh::DofMap::end_dof(), libMesh::DofMap::end_old_dof(), libMesh::EnsightIO::EnsightIO(), libMesh::MeshFunction::find_element(), libMesh::MeshFunction::find_elements(), libMesh::UnstructuredMesh::find_neighbors(), libMesh::DofMap::first_dof(), libMesh::DofMap::first_old_dof(), libMesh::Nemesis_IO_Helper::get_cmap_params(), libMesh::Nemesis_IO_Helper::get_eb_info_global(), libMesh::Nemesis_IO_Helper::get_elem_cmap(), libMesh::Nemesis_IO_Helper::get_elem_map(), libMesh::MeshBase::get_info(), libMesh::DofMap::get_info(), libMesh::Nemesis_IO_Helper::get_init_global(), libMesh::Nemesis_IO_Helper::get_init_info(), libMesh::Nemesis_IO_Helper::get_loadbal_param(), libMesh::Nemesis_IO_Helper::get_node_cmap(), libMesh::Nemesis_IO_Helper::get_node_map(), libMesh::Nemesis_IO_Helper::get_ns_param_global(), libMesh::Nemesis_IO_Helper::get_ss_param_global(), libMesh::SparsityPattern::Build::handle_vi_vj(), libMesh::SystemSubsetBySubdomain::init(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::ExodusII_IO_Helper::initialize_element_variables(), libMesh::ExodusII_IO_Helper::initialize_global_variables(), libMesh::ExodusII_IO_Helper::initialize_nodal_variables(), libMesh::DistributedMesh::insert_elem(), libMesh::DofMap::is_evaluable(), libMesh::SparsityPattern::Build::join(), libMesh::DofMap::last_dof(), libMesh::MeshTools::libmesh_assert_consistent_distributed(), libMesh::MeshTools::libmesh_assert_consistent_distributed_nodes(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_object_ids(), libMesh::DofMap::local_variable_indices(), libMesh::MeshRefinement::make_coarsening_compatible(), libMesh::MeshBase::n_active_local_elem(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::DofMap::n_local_dofs(), libMesh::System::n_local_dofs(), libMesh::MeshBase::n_local_elem(), libMesh::MeshBase::n_local_nodes(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::SparsityPattern::Build::operator()(), libMesh::DistributedMesh::own_node(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::Nemesis_IO_Helper::put_cmap_params(), libMesh::Nemesis_IO_Helper::put_elem_cmap(), libMesh::Nemesis_IO_Helper::put_elem_map(), libMesh::Nemesis_IO_Helper::put_loadbal_param(), libMesh::Nemesis_IO_Helper::put_node_cmap(), libMesh::Nemesis_IO_Helper::put_node_map(), libMesh::NameBasedIO::read(), libMesh::Nemesis_IO::read(), libMesh::XdrIO::read(), libMesh::CheckpointIO::read(), libMesh::ExodusII_IO_Helper::read_elem_num_map(), libMesh::ExodusII_IO_Helper::read_global_values(), libMesh::CheckpointIO::read_header(), libMesh::XdrIO::read_header(), libMesh::System::read_header(), libMesh::System::read_legacy_data(), libMesh::ExodusII_IO_Helper::read_node_num_map(), libMesh::System::read_parallel_data(), libMesh::System::read_SCALAR_dofs(), libMesh::XdrIO::read_serialized_bc_names(), libMesh::XdrIO::read_serialized_bcs_helper(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::XdrIO::read_serialized_connectivity(), libMesh::System::read_serialized_data(), libMesh::XdrIO::read_serialized_nodes(), libMesh::XdrIO::read_serialized_nodesets(), libMesh::XdrIO::read_serialized_subdomain_names(), libMesh::System::read_serialized_vector(), libMesh::System::read_serialized_vectors(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::CheckpointIO::select_split_config(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::LaplaceMeshSmoother::smooth(), libMesh::MeshTools::total_weight(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::Parallel::Packing< T >::unpack(), libMesh::DistributedMesh::update_parallel_id_counts(), libMesh::NameBasedIO::write(), libMesh::XdrIO::write(), libMesh::CheckpointIO::write(), libMesh::EquationSystems::write(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::ExodusII_IO::write_element_data(), libMesh::ExodusII_IO_Helper::write_element_values(), libMesh::ExodusII_IO_Helper::write_elements(), libMesh::ExodusII_IO::write_global_data(), libMesh::ExodusII_IO_Helper::write_global_values(), libMesh::System::write_header(), libMesh::ExodusII_IO::write_information_records(), libMesh::ExodusII_IO_Helper::write_information_records(), libMesh::ExodusII_IO_Helper::write_nodal_coordinates(), libMesh::UCDIO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data_discontinuous(), libMesh::ExodusII_IO_Helper::write_nodal_values(), libMesh::Nemesis_IO_Helper::write_nodesets(), libMesh::ExodusII_IO_Helper::write_nodesets(), libMesh::System::write_parallel_data(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bc_names(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::System::write_serialized_data(), libMesh::XdrIO::write_serialized_nodes(), libMesh::XdrIO::write_serialized_nodesets(), libMesh::XdrIO::write_serialized_subdomain_names(), libMesh::System::write_serialized_vector(), libMesh::System::write_serialized_vectors(), libMesh::Nemesis_IO_Helper::write_sidesets(), libMesh::ExodusII_IO_Helper::write_sidesets(), libMesh::ExodusII_IO::write_timestep(), libMesh::ExodusII_IO_Helper::write_timestep(), and libMesh::ExodusII_IO::write_timestep_discontinuous().
void libMesh::NonlinearSolver< T >::set_solver_configuration | ( | SolverConfiguration & | solver_configuration | ) |
Set the solver configuration object.
Definition at line 80 of file nonlinear_solver.C.
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pure virtual |
Solves the nonlinear system.
Implemented in libMesh::PetscNonlinearSolver< T >, libMesh::PetscNonlinearSolver< Number >, libMesh::NoxNonlinearSolver< T >, and libMesh::NoxNonlinearSolver< Number >.
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inline |
Definition at line 280 of file nonlinear_solver.h.
Referenced by libMesh::Problem_Interface::computeF(), libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), libMesh::libmesh_petsc_snes_jacobian(), libMesh::libmesh_petsc_snes_postcheck(), and libMesh::libmesh_petsc_snes_residual_helper().
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inline |
Definition at line 285 of file nonlinear_solver.h.
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protectedinherited |
Definition at line 107 of file parallel_object.h.
Referenced by libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::ParallelObject::comm(), libMesh::ParallelObject::n_processors(), libMesh::ParallelObject::operator=(), and libMesh::ParallelObject::processor_id().
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staticprotectedinherited |
Actually holds the data.
Definition at line 122 of file reference_counter.h.
Referenced by libMesh::ReferenceCounter::get_info(), libMesh::ReferenceCounter::increment_constructor_count(), and libMesh::ReferenceCounter::increment_destructor_count().
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staticprotectedinherited |
Flag to control whether reference count information is printed when print_info is called.
Definition at line 141 of file reference_counter.h.
Referenced by libMesh::ReferenceCounter::disable_print_counter_info(), libMesh::ReferenceCounter::enable_print_counter_info(), and libMesh::ReferenceCounter::print_info().
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protected |
Flag indicating if the data structures have been initialized.
Definition at line 366 of file nonlinear_solver.h.
Referenced by libMesh::NonlinearSolver< Number >::initialized().
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staticprotectedinherited |
Mutual exclusion object to enable thread-safe reference counting.
Definition at line 135 of file reference_counter.h.
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staticprotectedinherited |
The number of objects. Print the reference count information when the number returns to 0.
Definition at line 130 of file reference_counter.h.
Referenced by libMesh::ReferenceCounter::n_objects(), libMesh::ReferenceCounter::ReferenceCounter(), and libMesh::ReferenceCounter::~ReferenceCounter().
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protected |
Holds the Preconditioner object to be used for the linear solves.
Definition at line 371 of file nonlinear_solver.h.
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protected |
Optionally store a SolverOptions object that can be used to set parameters like solver type, tolerances and iteration limits.
Definition at line 377 of file nonlinear_solver.h.
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protected |
A reference to the system we are solving.
Definition at line 361 of file nonlinear_solver.h.
Referenced by libMesh::NonlinearSolver< Number >::system().
Real libMesh::NonlinearSolver< T >::absolute_residual_tolerance |
The NonlinearSolver should exit after the residual is reduced to either less than absolute_residual_tolerance or less than relative_residual_tolerance times the initial residual.
Users should increase any of these tolerances that they want to use for a stopping condition.
Definition at line 312 of file nonlinear_solver.h.
Real libMesh::NonlinearSolver< T >::absolute_step_tolerance |
The NonlinearSolver should exit after the full nonlinear step norm is reduced to either less than absolute_step_tolerance or less than relative_step_tolerance times the largest nonlinear solution which has been seen so far.
Users should increase any of these tolerances that they want to use for a stopping condition.
relative_step_tolerance!
Definition at line 326 of file nonlinear_solver.h.
void(* libMesh::NonlinearSolver< T >::bounds) (NumericVector< Number > &XL, NumericVector< Number > &XU, sys_type &S) |
Function that computes the lower and upper bounds XL
and XU
on the solution of the nonlinear system.
Definition at line 199 of file nonlinear_solver.h.
NonlinearImplicitSystem::ComputeBounds* libMesh::NonlinearSolver< T >::bounds_object |
Object that computes the bounds vectors and .
Definition at line 205 of file nonlinear_solver.h.
bool libMesh::NonlinearSolver< T >::converged |
After a call to solve this will reflect whether or not the nonlinear solve was successful.
Definition at line 350 of file nonlinear_solver.h.
NonlinearImplicitSystem::ComputeResidual* libMesh::NonlinearSolver< T >::fd_residual_object |
Object that computes the residual R(X)
of the nonlinear system at the input iterate X
for the purpose of forming a finite-differenced Jacobian.
Definition at line 152 of file nonlinear_solver.h.
Referenced by libMesh::libmesh_petsc_snes_fd_residual().
Real libMesh::NonlinearSolver< T >::initial_linear_tolerance |
Any required linear solves will at first be done with this tolerance; the NonlinearSolver may tighten the tolerance for later solves.
Definition at line 339 of file nonlinear_solver.h.
void(* libMesh::NonlinearSolver< T >::jacobian) (const NumericVector< Number > &X, SparseMatrix< Number > &J, sys_type &S) |
Function that computes the Jacobian J(X)
of the nonlinear system at the input iterate X
.
Definition at line 165 of file nonlinear_solver.h.
Referenced by libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), and libMesh::libmesh_petsc_snes_jacobian().
NonlinearImplicitSystem::ComputeJacobian* libMesh::NonlinearSolver< T >::jacobian_object |
Object that computes the Jacobian J(X)
of the nonlinear system at the input iterate X
.
Definition at line 173 of file nonlinear_solver.h.
Referenced by libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), and libMesh::libmesh_petsc_snes_jacobian().
void(* libMesh::NonlinearSolver< T >::matvec) (const NumericVector< Number > &X, NumericVector< Number > *R, SparseMatrix< Number > *J, sys_type &S) |
Function that computes either the residual or the Jacobian of the nonlinear system at the input iterate .
R
or J
could be nullptr
. Definition at line 182 of file nonlinear_solver.h.
Referenced by libMesh::Problem_Interface::computeF(), libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), libMesh::libmesh_petsc_snes_jacobian(), and libMesh::libmesh_petsc_snes_residual().
unsigned int libMesh::NonlinearSolver< T >::max_function_evaluations |
Maximum number of function evaluations.
Definition at line 300 of file nonlinear_solver.h.
unsigned int libMesh::NonlinearSolver< T >::max_linear_iterations |
Each linear solver step should exit after max_linear_iterations
is exceeded.
Definition at line 333 of file nonlinear_solver.h.
unsigned int libMesh::NonlinearSolver< T >::max_nonlinear_iterations |
Maximum number of non-linear iterations.
Definition at line 295 of file nonlinear_solver.h.
NonlinearImplicitSystem::ComputeResidual* libMesh::NonlinearSolver< T >::mffd_residual_object |
Object that computes the residual R(X)
of the nonlinear system at the input iterate X
for the purpose of forming Jacobian-vector products via finite differencing.
Definition at line 159 of file nonlinear_solver.h.
Referenced by libMesh::libmesh_petsc_snes_mffd_residual().
Real libMesh::NonlinearSolver< T >::minimum_linear_tolerance |
The tolerance for linear solves is kept above this minimum
Definition at line 344 of file nonlinear_solver.h.
void(* libMesh::NonlinearSolver< T >::nearnullspace) (std::vector< NumericVector< Number > * > &sp, sys_type &S) |
Function that computes a basis for the Jacobian's near nullspace – the set of "low energy modes" – that can be used for AMG coarsening, if the solver supports it (e.g., ML, PETSc's GAMG).
Definition at line 242 of file nonlinear_solver.h.
NonlinearImplicitSystem::ComputeVectorSubspace* libMesh::NonlinearSolver< T >::nearnullspace_object |
A callable object that computes a basis for the Jacobian's near nullspace – the set of "low energy modes" – that can be used for AMG coarsening, if the solver supports it (e.g., ML, PETSc's GAMG).
Definition at line 249 of file nonlinear_solver.h.
void(* libMesh::NonlinearSolver< T >::nullspace) (std::vector< NumericVector< Number > * > &sp, sys_type &S) |
Function that computes a basis for the Jacobian's nullspace – the kernel or the "zero energy modes" – that can be used in solving a degenerate problem iteratively, if the solver supports it (e.g., PETSc's KSP).
Definition at line 213 of file nonlinear_solver.h.
NonlinearImplicitSystem::ComputeVectorSubspace* libMesh::NonlinearSolver< T >::nullspace_object |
A callable object that computes a basis for the Jacobian's nullspace – the kernel or the "zero energy modes" – that can be used in solving a degenerate problem iteratively, if the solver supports it (e.g., PETSc's KSP).
Definition at line 221 of file nonlinear_solver.h.
void(* libMesh::NonlinearSolver< T >::postcheck) (const NumericVector< Number > &old_soln, NumericVector< Number > &search_direction, NumericVector< Number > &new_soln, bool &changed_search_direction, bool &changed_new_soln, sys_type &S) |
Function that performs a "check" on the Newton search direction and solution after each nonlinear step. See documentation for the NonlinearImplicitSystem::ComputePostCheck object for more information about the calling sequence.
Definition at line 263 of file nonlinear_solver.h.
Referenced by libMesh::libmesh_petsc_snes_postcheck().
NonlinearImplicitSystem::ComputePostCheck* libMesh::NonlinearSolver< T >::postcheck_object |
A callable object that is executed after each nonlinear iteration. Allows the user to modify both the search direction and the solution vector in an application-specific way.
Definition at line 275 of file nonlinear_solver.h.
Referenced by libMesh::libmesh_petsc_snes_postcheck().
Real libMesh::NonlinearSolver< T >::relative_residual_tolerance |
Definition at line 313 of file nonlinear_solver.h.
Real libMesh::NonlinearSolver< T >::relative_step_tolerance |
Definition at line 327 of file nonlinear_solver.h.
void(* libMesh::NonlinearSolver< T >::residual) (const NumericVector< Number > &X, NumericVector< Number > &R, sys_type &S) |
Function that computes the residual R(X)
of the nonlinear system at the input iterate X
.
Definition at line 138 of file nonlinear_solver.h.
Referenced by libMesh::Problem_Interface::computeF(), and libMesh::libmesh_petsc_snes_residual().
NonlinearImplicitSystem::ComputeResidualandJacobian* libMesh::NonlinearSolver< T >::residual_and_jacobian_object |
Object that computes either the residual or the Jacobian of the nonlinear system at the input iterate .
R
or J
could be nullptr
. Definition at line 194 of file nonlinear_solver.h.
Referenced by libMesh::Problem_Interface::computeF(), libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), libMesh::libmesh_petsc_snes_jacobian(), and libMesh::libmesh_petsc_snes_residual().
NonlinearImplicitSystem::ComputeResidual* libMesh::NonlinearSolver< T >::residual_object |
Object that computes the residual R(X)
of the nonlinear system at the input iterate X
.
Definition at line 146 of file nonlinear_solver.h.
Referenced by libMesh::Problem_Interface::computeF(), libMesh::libmesh_petsc_snes_fd_residual(), libMesh::libmesh_petsc_snes_mffd_residual(), and libMesh::libmesh_petsc_snes_residual().
void(* libMesh::NonlinearSolver< T >::transpose_nullspace) (std::vector< NumericVector< Number > * > &sp, sys_type &S) |
Function that computes a basis for the transpose Jacobian's nullspace – when solving a degenerate problem iteratively, if the solver supports it (e.g., PETSc's KSP), it is used to remove contributions outside of R(jac)
Definition at line 228 of file nonlinear_solver.h.
NonlinearImplicitSystem::ComputeVectorSubspace* libMesh::NonlinearSolver< T >::transpose_nullspace_object |
A callable object that computes a basis for the transpose Jacobian's nullspace – when solving a degenerate problem iteratively, if the solver supports it (e.g., PETSc's KSP), it is used to remove contributions outside of R(jac)
Definition at line 235 of file nonlinear_solver.h.
void(* libMesh::NonlinearSolver< T >::user_presolve) (sys_type &S) |
Customizable function pointer which users can attach to the solver. Gets called prior to every call to solve().
Definition at line 255 of file nonlinear_solver.h.